thank you for looking at my first post. I need to find within a string of substantial length, patterns that will allow me to break that string up into components of structure. This question is related to a biological sequence where in DNA there are regions that code for genes, and regions that do not. The only characters permitted are A,C,G,T. Assume that the regions that are coding and non-coding are unknown. Thus the goal is the find a pattern within the string that allows differentiation of coding and non-coding regions. In reality, there are known coding regions but I wanted to figure out how to approach this problem in the absence of this information. I have a few ideas but I wanted to see how you experienced programmers and mathematicians would approach this. I am a beginner programmer and I do not have a background in maths thus I am hoping to learn from you all. Thank you for your attention.
Finding structure within a string
81 Views Asked by kajendiran At
0
There are 0 best solutions below
Related Questions in STRING
- SML - Find same elements in a string
- match hex string with list indice
- How can I determine the index of the same set of characters between two strings that are of different lengths?
- String.replace() isn't working like I expect
- How to do a case-insensitive string comparison?
- Trying to save an np array with string and floats, but getting a error
- String replace with integer not working
- How to calculate a length of array with out using library
- Java replace every Nth specific character (e.g. space) in String
- Split the strings into two parts Python
- Perl Regex: Merge multiple one-character substrings
- Squid S2275 does not know about format string argument indexes
- more efficient way of remove a few characters from the end of a string
- python member str performance too slow
- String.split() not behaving in android
Related Questions in ANALYSIS
- quicksort, random pivot, analysis, O(nlogn)
- Can I use scikit-learn with Django framework?
- Data/Structure Validation (for R)
- automate checking of number set associations
- Data Analysis and Scatter Plot different file and different column
- Split clustered data and interpolate by a power function
- Merge multiple pandas columns into new column
- Complexity of a nested geometric sequence
- How to loop plot graph from matplotlib without having to close window?
- Using ggsurv function in R version 3.1.0
- How can I count in R how many times an occurence appears?
- How to analyze Malware when it infected all my exe files
- Run-time of a function to find the (n / 2^k)th element of a list of size n?
- SQL Server Analysis Services - using IgnoreUnrelatedDimensions
- Time Series DFT Signals Clustering
Related Questions in PATTERN-FINDING
- Searching for matching attributes
- Find coordinate of a cell in an array of characters
- Check every string in textfile for substring
- Finding structure within a string
- How can I find the right most occurence with the Boyer Moore algorithm?
- How can i find a pattern in an array of integers?
- Finding most similar Range in an Array
- Find lines in one Object based on strings in other object
- Pattern finding algorithms in NodeJS
- Java, How can I find a pattern in a File and read the whole line?
- How to find a sequence of numbers in an array in R?
- How to turn a list of strings into a list of tuples by finding the largest repeating patterns in them in python3?
- Is there any way to count how many time specific patterns occurred in DataFrame?
- Finding a pattern in a binary matrix with R
- How to get a parameter as a result of a search condition from a XML-File?
Trending Questions
- UIImageView Frame Doesn't Reflect Constraints
- Is it possible to use adb commands to click on a view by finding its ID?
- How to create a new web character symbol recognizable by html/javascript?
- Why isn't my CSS3 animation smooth in Google Chrome (but very smooth on other browsers)?
- Heap Gives Page Fault
- Connect ffmpeg to Visual Studio 2008
- Both Object- and ValueAnimator jumps when Duration is set above API LvL 24
- How to avoid default initialization of objects in std::vector?
- second argument of the command line arguments in a format other than char** argv or char* argv[]
- How to improve efficiency of algorithm which generates next lexicographic permutation?
- Navigating to the another actvity app getting crash in android
- How to read the particular message format in android and store in sqlite database?
- Resetting inventory status after order is cancelled
- Efficiently compute powers of X in SSE/AVX
- Insert into an external database using ajax and php : POST 500 (Internal Server Error)
Popular Questions
- How do I undo the most recent local commits in Git?
- How can I remove a specific item from an array in JavaScript?
- How do I delete a Git branch locally and remotely?
- Find all files containing a specific text (string) on Linux?
- How do I revert a Git repository to a previous commit?
- How do I create an HTML button that acts like a link?
- How do I check out a remote Git branch?
- How do I force "git pull" to overwrite local files?
- How do I list all files of a directory?
- How to check whether a string contains a substring in JavaScript?
- How do I redirect to another webpage?
- How can I iterate over rows in a Pandas DataFrame?
- How do I convert a String to an int in Java?
- Does Python have a string 'contains' substring method?
- How do I check if a string contains a specific word?