Graphviz drawings partly cropped

Question

I am using Graphviz to draw graphs from adjacency matrices and in some situations I get a .ps file in which the graph appears partly cropped. Like this:

This is highly annoying and unusable. Can someone please explain what is going on and how to work around this problem?

Answer 1

Is there a reason you need to have postscript? Have you considered other formats? e.g.

  neato.exe myfile.dot -Tpng -O
  neato.exe myfile.dot -Tsvg -O

http://www.graphviz.org/doc/info/output.html

Answer 2

I had the same problem of cropped output. Solved it by outputting in png format

dot -Tpng myfile.dot -o ~/output.png

OR

`command that generates *.dot` | dot -Tpng -o ~/output.png

If the output node sizes are too small to see increase their size using -Gsize argument