How can I refactor in Helios with Subclipse without problems committing changes?

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I am running Eclipse Helio with Subclipse on Windows XP.

When I do simple refactoring in Java that results in folders being deleted, commit fails. I can get around this one folder at a time by "update to head" and then "Mark Resolved" but this is very tedious.

In more complex refactors, things seem to get tangled where even that doesn't work.

I am not doing anything weird like going outside of eclipse to move files around, etc.

Help! This makes SVN almost unusable.

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I don't know what is exactly the use case, but I haven't seen such behavior. try to synchronize before you do the actual commit.
Team -> synchronize...