How to fit smaller spheres inside a 3D shape such as Mickey Mouse?

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I am looking at a problem that takes in an argument of a 3D STL file -> Shape and (rmin -> Minimum Radius) and fits in a maximum number of spheres inside the shape. The function should spit out position and radius (x,y,z,r). One such program is called CLUMP-https://www.mathworks.com/matlabcentral/fileexchange/98314-clump-code-library-to-generate-multi-sphere-particles

However, the clump is not performing so well for a Mickey Mouse-type shape. I am attaching my findings below. My aim is to get the TensorA Center of the reaction matrix to be a diagonal one and the rest of the elements to be zero.

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