How can I view the Picard BAM file format using Java?
How to get consensus sequence from BAM file format on java (by means of Picard)
716 Views Asked by user1437708 At
1
There are 1 best solutions below
Related Questions in JAVA
- Add image to JCheckBoxMenuItem
- How to access invisible Unordered List element with Selenium WebDriver using Java
- Inheritance in Java, apparent type vs actual type
- Java catch the ball Game
- Access objects variable & method by name
- GridBagLayout is displaying JTextField and JTextArea as short, vertical lines
- Perform a task each interval
- Compound classes stored in an array are not accessible in selenium java
- How to avoid concurrent access to a resource?
- Why does processing goes slower on implementing try catch block in java?
- Redirect inside java interceptor
- Push toolbar content below statusbar
- Animation in Java on top of JPanel
- JPA - How to query with a LIKE operator in combination with an AttributeConverter
- Java Assign a Value to an array cell
Related Questions in MEDIA
- Re media query in code
- Media content tag missing from rss feed generated by Rome 1.0
- Different sound on each button
- dynamic video source change issue in azure media player
- How to specifically display certain columns in nth-child?
- Saving a sound bite as a ringtone
- Media files end up in in a pycharm subdirectory when uploading
- phonegap media plugin cant handle multiple sounds?
- Changing main image source on product page in magento
- Retrieve user friends media in instgram API
- Video stream keeps browser busy/stuck
- CSS selector not working with children
- Closed Captions/Subtitles not working for AVPlayer but are in Safari: HLS
- Div Text's Color Changes when Printed
- How to play songs from the Cursor in android?
Related Questions in PICARD
- How to get consensus sequence from BAM file format on java (by means of Picard)
- Why is Picard MarkDuplicates deleting .bam files in place of .bai files in my Snakemake workflow?
- How does one set the RAM and CPU parameters for java programs running in an anaconda environment?
- linux merge multiple files in picard
- MarkDuplicates Picard
- VCF4.2 file not recognised by GATK
- R How to obtain the coefficients of a polynomial expression?
- Why doesn't subprocess.Popen() give live feed?
- How to convert fastq to uBAM with picard dock on google cloud
- An interesting cron, bash, perl and java problem
- Is there a way to set parameters for the Java VM when using a Snakemake wrapper?
- Reorganize music library with Picard or another program
- Does picard markduplicate toggle PCR duplicate samflag
- Picard SortSam speed up?
- How to run plugins on Picard as a developer
Trending Questions
- UIImageView Frame Doesn't Reflect Constraints
- Is it possible to use adb commands to click on a view by finding its ID?
- How to create a new web character symbol recognizable by html/javascript?
- Why isn't my CSS3 animation smooth in Google Chrome (but very smooth on other browsers)?
- Heap Gives Page Fault
- Connect ffmpeg to Visual Studio 2008
- Both Object- and ValueAnimator jumps when Duration is set above API LvL 24
- How to avoid default initialization of objects in std::vector?
- second argument of the command line arguments in a format other than char** argv or char* argv[]
- How to improve efficiency of algorithm which generates next lexicographic permutation?
- Navigating to the another actvity app getting crash in android
- How to read the particular message format in android and store in sqlite database?
- Resetting inventory status after order is cancelled
- Efficiently compute powers of X in SSE/AVX
- Insert into an external database using ajax and php : POST 500 (Internal Server Error)
Popular Questions
- How do I undo the most recent local commits in Git?
- How can I remove a specific item from an array in JavaScript?
- How do I delete a Git branch locally and remotely?
- Find all files containing a specific text (string) on Linux?
- How do I revert a Git repository to a previous commit?
- How do I create an HTML button that acts like a link?
- How do I check out a remote Git branch?
- How do I force "git pull" to overwrite local files?
- How do I list all files of a directory?
- How to check whether a string contains a substring in JavaScript?
- How do I redirect to another webpage?
- How can I iterate over rows in a Pandas DataFrame?
- How do I convert a String to an int in Java?
- Does Python have a string 'contains' substring method?
- How do I check if a string contains a specific word?
Have you tried http://picard.sourceforge.net/ - this is a Java library for SAM and BAM Picard files, and its on SourceForge so the source code should be available to you.