Do you know of any tools that help us measure coupling and cohesion in the system?
Tools for measuring coupling and cohesion
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You can try static code analisys tools
Depending on the language you use you can use Tools to get several information from static analisys. Personally I use free tool Source Monitor to collect information such as Number of calls and Methods/Class that shows you something related to coupling and cohesion.
You can use Quality Check Tools to (FxCop, Checkstyle, PMD, etc.).