I am testing the watershed OpenCV 3.0 implementation with some samples and I get strange results, or at least what I don't expect.
I'm applying the following:
Read the input image
import numpy as np
import cv2
from matplotlib import pyplot as plt
import numpy
#Reading original image
img = cv2.imread('c:\\tmp\\image.png')
img = 255-img
cv2.imshow('Input',img)
cv2.waitKey(0)
cv2.destroyAllWindows()
Apply an Otsu binarization to discriminate foreground vs background
#Binarizing by applying threshold
gray = cv2.cvtColor(img,cv2.COLOR_BGR2GRAY)
ret, thresh = cv2.threshold(gray,0,255,cv2.THRESH_BINARY_INV+cv2.THRESH_OTSU)
# noise removal
kernel = np.ones((3,3),np.uint8)
opening = cv2.morphologyEx(thresh,cv2.MORPH_OPEN,kernel, iterations = 2)
opening = ((opening - opening.min()) / (opening.max() - opening.min()) * 255).astype(numpy.uint8)
cv2.imshow('Threshold', opening)
cv2.waitKey(0)
cv2.destroyAllWindows()
Get the connected points to be applied as markers
# Marker labelling
ret, markers = cv2.connectedComponents(opening)
Run watershed
# Apply watershed
markers = cv2.watershed(img,markers)
#Show result
img[markers == -1] = [255,0,0]
cv2.imshow('Watershed', img)
cv2.waitKey(0)
cv2.destroyAllWindows()
Result The result (blue line) is a bit shifted from what I would expect (red line)