upsource usage in project with code generation

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I'm trying to use Upsource code review tool for my java/maven project. We are using JOOQ, and it produces a lot of generated classes during project compilation, and these classes are not stored in vcs. And if some class uses JOOQ-generated classes, then code analyse shows errors (Can't resolve symbol). Is it's possible to fix this problem in a some way? I just don't understand, does upsource build the project internally, or not. If it does, then where I can find the build log?

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