Where are files marked as assume-unchanged in Git?

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Yesterday I was struggling with Git, because I could not find any of the .java-files that I wanted to commit in neither Git Bash or Eclipse Git-tool. I searched around and I found that allmsot every file that i evered touched in the project is marked as "assume-unchanged". (never heard of it before yesterday). I have tried to --un-assume-unchanged both as command in Git Bash and from the conext-menu in Eclipse. (found this answer on SO).But all files are still marked as assume-unchanged.

I have tried Git reset, deleted the whole local repository and cloned again, Same problem.

How does Git work, are that fiels marked as assume-unchanged listed in a file ors something? Is it possible to unmark them in another way than list them in Git Bash? Or do you have other ideas on how to solve my problem? (I have saved my changed files separately so that I can reset or deleete the repo)

I am not sure if it might be a problem, but I have 2 copies of the repo on my Machine , and 2 separate Eclipse Workspaces.

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