I have used ggplot2 to create a boxplot. I want the 'extreme' outliers (identified by the is_extreme function) to be in a different colour to the other outliers.
Here is my code:
ggplot(Mooney_data) + geom_boxplot(aes(x=Phase, y=RT), outlier.colour='red')+geom_point(data=Mooney_data[is_extreme(Mooney_data$RT),], aes(x= Phase, y=RT, col=factor(is_extreme(RT))))+ theme(legend.position='none')+mytheme
This gives me the extreme outliers in blue. However, I don't understand why the rest of the outliers are in two different shades of red? How can I correct this?

You're getting two different shades of red because the default color scheme for ggplot with two factor levels is
hue_pal()(2), the first of which is the shade of red you are seeing in addition to the 'red' that you have specified for outliers.If you want blue extreme outliers, put the
colargument outside of thegeom_pointaesthetic: