I am trying to run a NEURON simulation via python. I got all the libraries in order and am able to run some simple simulations, but am experiencing some troubles with a more complicated code. If you have any idea how to help I will appreciate it very much
Problem number 1:
Neuron doesn't open part of a .hoc
file even though it is compiled. I get the error:
NEURON: Can't open import3d/import3d_sec.hoc
in import3d.hoc near line 1
{xopen("import3d/import3d_sec.hoc")}
^
xopen("import3d/i...")
xopen("import3d.hoc")
execute1("{xopen("im...")
load_file("C:/Users/U...")
Problem number 2:
The simulator doesn't recognize a mechanism I am trying to use. here I am a bit lost and don't know to describe further, but this is the error message:
NEURON: Im is not a MECHANISM
in L5PCbiophys5b.hoc near line 26
insert Im
^
xopen("L5PCbiophy...")
execute1("{xopen("L5...")
load_file("C:/Users/U...")
Problem number 3:
Not recognizing as a template:
NEURON: Import3d_Neurolucida3 is not a template
in L5PCtemplate_2.hoc near line 26
nl = new Import3d_Neurolucida3()
^
xopen("L5PCtempla...")
execute1("{xopen("L5...")
load_file("C:/Users/U...")
insert
should match with theSUFFIX
statement in the file; also make sure that file was compiled in and that the dll is loaded (should be a message when you start nrniv)use load_file()
instead ofxopen()