I am trying to convert a dataframe to RDF. The dataframe contains literals as well as IRIs.
I'm doing
test_withangles.rdf <-
rdflib::as_rdf(x = test_withangles,
key = 'uuid')
rdf_serialize(rdf = test_withangles.rdf, doc = "test_withangles.ttl")
on
+--------------------------------------+-----------------------------------------------+------------------------------------------------------+
| uuid | source_ontology | source_term |
+--------------------------------------+-----------------------------------------------+------------------------------------------------------+
| 7ca250c1-0747-4db0-b613-a1bb45848711 | <http://192.168.0.233:8080/ontologies/RXNORM> | <http://purl.bioontology.org/ontology/RXNORM/706898> |
+--------------------------------------+-----------------------------------------------+------------------------------------------------------+
| e10acb95-e9d9-4804-a227-844f3e551c78 | <http://192.168.0.233:8080/ontologies/RXNORM> | <http://purl.bioontology.org/ontology/RXNORM/214081> |
+--------------------------------------+-----------------------------------------------+------------------------------------------------------+
and getting
@base <localhost://> .
@prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> .
<df:7ca250c1-0747-4db0-b613-a1bb45848711>
<df:source_ontology> <http://192.168.0.233:8080/ontologies/RXNORM> ;
<df:source_term> "<http://purl.bioontology.org/ontology/RXNORM/706898>" .
<df:e10acb95-e9d9-4804-a227-844f3e551c78>
<df:source_ontology> <http://192.168.0.233:8080/ontologies/RXNORM> ;
<df:source_term> "<http://purl.bioontology.org/ontology/RXNORM/214081>" .
Why is it interpreting my source_term
column as strings, instead of IRIs?