I was stuck in the limitations of the Boinc Manager interface regarding CPU usage over time. This is particularly important when client runs on a machine that is also used for some other activities and you want to minimize the impact of having Boinc running its processes.
Windows BOINC client - how can I fully customize processor usage?
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Besides configuring Manager to run only if computer is not used, when CPU usage is below some threshold, you can also customize it to use only some cores and only in some periods of time.
In order to achieve this, the steps are:
1) locate manager directory - this contains various executable files (like boinccmd.exe), configuration files etc.
2) edit (create if not exists) global_prefs_override.xml configuration file in the manager directory. This should contain at least the tags you want to dynamically change. In my example, 100
3) use a custom made application to change global_prefs_override.xml and inform the manager that it has changed
For my own case, I have created a simple C# Console application that automatically changes cores usage based on provided parameters.
The code is provided below:
This is rudimentary, but it should be a good start for customizing how the manager runs its processes.