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20
Devhide
2024-12-28 15:11:08
182
Views
Edit line names with a new name containing an incremented value
Published on
28 December 2024 at 15:11
#regex
#perl
#awk
#sed
#fasta
998
Views
How to extract short sequence using window with specific step size?
Published on
29 December 2024 at 06:45
#python
#extract
#biopython
#fasta
164
Views
How to extract short sequence based on step size?
Published on
01 January 2025 at 21:32
#python
#bioinformatics
#extract
#biopython
#fasta
79
Views
Python3 write selected zones in a new file
Published on
26 December 2024 at 22:22
#python
#dictionary
#stock
#fasta
774
Views
Subset sequence data in fasta file based on IDs stored in listed data frames
Published on
03 January 2025 at 16:45
#r
#subset
#fasta
#seq
66
Views
How to print two lines if first lines matches a pattern?
Published on
04 December 2024 at 07:44
#fasta
305
Views
python script : sequence identifier and number of possible sequences
Published on
04 December 2024 at 07:46
#python
#fasta
#ambiguous
1.8k
Views
sort fasta by sequence size
Published on
04 December 2024 at 07:36
#python-3.x
#sorting
#bioinformatics
#fasta
600
Views
Translate genes in a FASTA file using seqinr and keep the annotation
Published on
04 December 2024 at 07:46
#r
#bioinformatics
#fasta
971
Views
searching for sequences in a FASTA format
Published on
04 December 2024 at 07:04
#python
#regex
#biopython
#fasta
3.4k
Views
Converting .fasta files to .gff3 files
Published on
01 January 2025 at 18:35
#bioinformatics
#data-conversion
#fasta
4.2k
Views
R: read fasta files into data.frame using base R - NOT Biostrings (and the like)
Published on
30 December 2024 at 05:01
#r
#dataframe
#fasta
#read.table
469
Views
Creating lists of organism and dna sequence data from a multiple fasta file
Published on
04 December 2024 at 07:48
#python
#bioinformatics
#fasta
1.1k
Views
fasta file reading python
Published on
17 December 2024 at 00:59
#python
#bioinformatics
#fasta
828
Views
How do you retrieve individual DNA sequences after importing an alignment into R?
Published on
04 December 2024 at 07:49
#r
#bioinformatics
#fasta
18.7k
Views
Undefined subroutines &main error in Perl
Published on
04 December 2024 at 07:39
#perl
#bioinformatics
#subroutine
#fasta
1.7k
Views
Python Dict and Forloop with FASTA file
Published on
04 December 2024 at 07:39
#python
#for-loop
#dictionary
#fasta
717
Views
vcf-consensus script error: The sequence N not found in the fasta file
Published on
06 January 2025 at 13:29
#bioinformatics
#variant
#fasta
#consensus
#vcf-variant-call-format
263
Views
Bash: how to optimize/parallelize a search through two large files to replace strings?
Published on
04 December 2024 at 07:49
#bash
#perl
#sed
#parallel-processing
#fasta
229
Views
Python - How to recognize EOL in FASTA file
Published on
01 January 2025 at 21:31
#python
#eol
#fasta
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