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7.3k
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Delete first line of all files in a folder (on ubuntu)

Published on
#ubuntu #awk #sed #terminal #bioinformatics
475
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With every loop iteration in Python use resulting file for subprocess call

Published on
#python #loops #subprocess #bioinformatics
554
Views

What might explain the [blastall] ERROR: Arguments must start with '-' error?

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#linux #bash #bioinformatics #blast
8.9k
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In bioinformatics, what is a singleton?

Published on
#bioinformatics #samtools
1.3k
Views

Coding genotypes from nucleotides to 0/1/2 in R (or Python)

Published on
#python #r #bioinformatics
162
Views

How to extract short sequence based on step size?

Published on
#python #bioinformatics #extract #biopython #fasta
717
Views

Find Substring of Trie Keys

Published on
#python #bioinformatics #trie #biopython #suffix-tree
134
Views

Identify conserved sequences in lists of integers

Published on
#python #bioinformatics
122
Views

How to extract start and end sites based on capital letter in a sequence?

Published on
#python #sequence #bioinformatics #extract
929
Views

getting records which are different from two fastq files

Published on
#python #bioinformatics #biopython
347
Views

choosing reads with Hamming distance zero

Published on
#python #python-2.7 #bioinformatics #biopython
381
Views

Bash: Converting 4 columns of text interleaved lines (tab-delimited columns to FASTQ file)

Published on
#bash #awk #bioinformatics #fastq
466
Views

Unable to read an SBML file in SBMLR

Published on
#r #bioinformatics #bioconductor #sbml
62
Views

How to extract coordinates in P-match result?

Published on
#python #bioinformatics #extract
242
Views

Repeated ordered sequence search algorithm

Published on
#algorithm #sequence #data-mining #dynamic-programming #bioinformatics
121
Views

Get unique lines based ONLY on 2 Columns

Published on
#python #bioinformatics #csv
48
Views

modifying line names to avoid redundancies when files are merged in terminal

Published on
#unix #terminal #bioinformatics
432
Views

Combined plot differing X axis values

Published on
#r #ggplot2 #bioinformatics
721
Views

cummeRbund Create Gene Set Error

Published on
#r #bioinformatics #genetics
343
Views

Bioconductor package "oligo" works fine on its own, but returns an error message when knitted as part of a .Rmd document

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#r #r-markdown #bioinformatics #bioconductor

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