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Nextflow: Script of python don't save output

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#python #nextflow
1.5k
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channel checks as empty even if it has content

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#channel #is-empty #empty-list #nextflow
318
Views

Nextflow - Channel.watchPath() method

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#python #nextflow
272
Views

Nexflow: structured inputs with files

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#nextflow
112
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How to channel output of one process as input to the next process in Nextflow?

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#nextflow
149
Views

Nextflow script to check adapter content and run trimmomatic

Published on
#bash #nextflow #rna-seq
179
Views

Nextflow - Multiqc process per sample instead of processing all the samples output together

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#groovy #nextflow
211
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Nextflow errors running on HPC: /bin/bash: .command.run: No such file or directory

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#linux #bioinformatics #hpc #nextflow
193
Views

how to chain Channel.fromFilePairs from one process to another process

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#nextflow
116
Views

How to instruct `splitCsv` to split by any whitespaces

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#nextflow
76
Views

group outputs by extension and chain one of these for next process

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#nextflow
63
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Nextflow - Google Batch Network options

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#google-cloud-platform #nextflow #google-batch
62
Views

how to do splitFastq by file number instead of read num in nextflow

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#nextflow
117
Views

Passing results from within a process into a conditional workflow in nextflow

Published on
#groovy #nextflow
186
Views

Nextflow error: Missing output files in a process

Published on
#bash #bioinformatics #nextflow #genome
57
Views

Azure Batch with Nextflow "Cannot create work-dir"

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#nextflow
40
Views

Running NextFlow pipeline in Jenkins

Published on
#jenkins #pipeline #nextflow
54
Views

Nextflow examples don't show expected output

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#nextflow
61
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Nextflow Process `MULTIMETRICS` declares 3 input channels but 5 were specified

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#nextflow
168
Views

How to obtain files from a directory path channel in nextflow

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#nextflow

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