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List Question
20
Devhide
2016-12-20 19:57:28
233
Views
Elegantly handle samples with insufficient data in workflow?
Published on
20 December 2016 at 19:57
#snakemake
168
Views
Defining Functions for Geany "Filetype"
Published on
04 January 2017 at 13:59
#geany
#snakemake
771
Views
Using regex in snakemake wildcards
Published on
04 January 2017 at 14:07
#snakemake
493
Views
Storing the result of a shell command
Published on
28 August 2017 at 09:01
#python
#shell
#snakemake
1.7k
Views
Use of argparse in Snakemake script
Published on
30 August 2017 at 23:57
#python
#python-3.x
#command-line-arguments
#argparse
#snakemake
50
Views
Any pathway analysis written in snakelike
Published on
31 August 2017 at 22:54
#bioinformatics
#snakemake
8.8k
Views
Can SnakeMake be forced to rerun rules when files are missing
Published on
31 August 2017 at 20:44
#delete-file
#snakemake
160
Views
Can the output file object be passed to an input function in SnakeMake?
Published on
05 September 2017 at 22:00
#input
#output
#filenames
#snakemake
783
Views
Accepting slightly different inputs to snakemake rule (.fq vs .fq.gz)
Published on
06 September 2017 at 03:57
#bioinformatics
#snakemake
1.9k
Views
Snakemake touch command
Published on
06 September 2017 at 10:13
#snakemake
124
Views
Proxy file on snakemake code
Published on
11 September 2017 at 14:11
#snakemake
154
Views
Many inputs to one output, access wildcards in input files
Published on
08 September 2017 at 16:32
#snakemake
569
Views
How to translate a simple target pattern rule to snakemake?
Published on
13 September 2017 at 13:06
#snakemake
969
Views
Multiple "params" in Snakemake file
Published on
13 September 2017 at 10:00
#snakemake
224
Views
Snakemake: rule generate strange results
Published on
19 September 2017 at 12:53
#snakemake
2.1k
Views
snakemake: How to log python scripts executed by script directive?
Published on
28 September 2020 at 12:09
#snakemake
99
Views
Snakemake on cluster: OutputException and submit one job for each wildcard item
Published on
28 September 2020 at 10:25
#python
#snakemake
#lsf
56
Views
snakemake covering old output file
Published on
28 September 2020 at 10:37
#conda
#pipeline
#snakemake
516
Views
Snakemake perform rules based on configs
Published on
30 September 2020 at 23:09
#snakemake
348
Views
How to parallelize a rule by input in Snakefile (with multiple outputs)
Published on
30 September 2020 at 19:52
#snakemake
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