I used Zxing library for reading QR codes, however, the failure ratio to read QR codes is quite high and was looking for alternatives.
BoofCV looks good according to tests: https://boofcv.org/index.php?title=Performance:QrCode
However, I'm struggling to make it work and find any tutorials in Windows command line using JAR files.
I have the latest 0.33.1 release libraries (https://sourceforge.net/projects/boofcv/files/v0.33.1/):

Is there any simple way to run from command line, I was expecting something like:
java -jar boofcv-recognition-0.33.1.jar -inputQRCodeImagePath [path to local image with QR code]
And then in command line to get text output of what was encoded in QR code, which I can process further.
Thanks in advance!
This feature has was added a few months ago. Download the BoofApplications, then follow the steps below:
java -jar applications.jar BatchScanQrCodesThat will print out help. To scan for QR codes in all directories in a path do the following:
Every 50 files it will print out the number of files scanned. Took less than a minute to scan the entire test set of QR codes 562 images. You will then have a file which looks like: