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Newick tree representation to scipy.cluster.hierarchy linkage matrix format

score 3.2k · Answer 1 · 2024-12-30 07:54:49

3.2k

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Newick tree representation to scipy.cluster.hierarchy linkage matrix format

Published on 30 December 2024 at 07:54

score 868 · Answer 2 · 2024-12-30 07:50:59

868

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Displaying discrete character data on a phylogeny using R

Published on 30 December 2024 at 07:50

score 530 · Answer 3 · 2025-01-06 07:59:52

530

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Skipping slow tasks in a loop in R

Published on 06 January 2025 at 07:59

score 466 · Answer 4 · 2024-12-29 02:55:21

466

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r - phyloseq - ordination of taxa other than species (family, order, etc.)

Published on 29 December 2024 at 02:55

score 8.1k · Answer 5 · 2024-12-30 07:52:33

8.1k

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All possible Regression in R: Saving coefficients in a matrix

Published on 30 December 2024 at 07:52

score 4.9k · Answer 6 · 2024-12-30 07:50:14

4.9k

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Branch length modification of a phylogenetic tree in R

Published on 30 December 2024 at 07:50

score 352 · Answer 7 · 2024-12-30 07:51:38

352

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Transform data frame/matrix to a different organized matrix

Published on 30 December 2024 at 07:51

score 1.5k · Answer 8 · 2024-12-30 07:48:21

1.5k

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Published on 30 December 2024 at 07:48

score 551 · Answer 9 · 2024-12-30 07:42:42

551

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Conda install Figtree

Published on 30 December 2024 at 07:42

score 488 · Answer 10 · 2024-12-30 07:52:32

488

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Error in seq.int(from, to, length.out = n) : 'to' must be a finite number #81

Published on 30 December 2024 at 07:52

score 1.4k · Answer 11 · 2024-12-30 07:43:10

1.4k

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phylogenetic tree comparison

Published on 30 December 2024 at 07:43

score 349 · Answer 12 · 2024-12-30 07:55:03

349

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Comparing trees with different leaf sets (different number and label of leaf nodes)

Published on 30 December 2024 at 07:55

score 3.3k · Answer 13 · 2025-01-06 08:00:53

3.3k

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Node labels on circular phylogenetic tree

Published on 06 January 2025 at 08:00

score 450 · Answer 14 · 2024-12-29 04:02:34

450

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Bootstrapped tree values differ from PAST

Published on 29 December 2024 at 04:02

score 118 · Answer 15 · 2025-01-02 20:40:50

118

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Phylogenetic linear model (PGLS): how to visualize uncertainty around model's predictions?

Published on 02 January 2025 at 20:40

score 121 · Answer 16 · 2024-12-30 07:56:40

121

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Error when trying to install BioGeoBears package dependency rexpokit no longer on CRAN and won't install

Published on 30 December 2024 at 07:56

score 85 · Answer 17 · 2025-01-07 15:50:37

85

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how to generate a heatmap of a correlation matrix with clustering and phylogenetic tree

Published on 07 January 2025 at 15:50

score 65 · Answer 18 · 2025-01-06 11:33:57

65

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use create_dendrogram with a phylogenetic tree

Published on 06 January 2025 at 11:33

score 46 · Answer 19 · 2025-01-03 14:47:14

46

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Error Message: 'numpy.dtype[bool_]' during Ipyrad Assembly of RADseq Data

Published on 03 January 2025 at 14:47

score 86 · Answer 20 · 2024-12-30 07:57:03

86

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How to plot slopes for factor levels, with confidence bands, using model-averaged coefficients? (PGLS, Phylogenetic Least Squares)

Published on 30 December 2024 at 07:57

List Question

Newick tree representation to scipy.cluster.hierarchy linkage matrix format

Displaying discrete character data on a phylogeny using R

Skipping slow tasks in a loop in R

r - phyloseq - ordination of taxa other than species (family, order, etc.)

All possible Regression in R: Saving coefficients in a matrix

Branch length modification of a phylogenetic tree in R

Transform data frame/matrix to a different organized matrix

Phylocom non-ultrametric tree vs ultrametric tree

Conda install Figtree

Error in seq.int(from, to, length.out = n) : 'to' must be a finite number #81

phylogenetic tree comparison

Comparing trees with different leaf sets (different number and label of leaf nodes)

Node labels on circular phylogenetic tree

Bootstrapped tree values differ from PAST

Phylogenetic linear model (PGLS): how to visualize uncertainty around model's predictions?

Error when trying to install BioGeoBears package dependency rexpokit no longer on CRAN and won't install

how to generate a heatmap of a correlation matrix with clustering and phylogenetic tree

use create_dendrogram with a phylogenetic tree

Error Message: 'numpy.dtype[bool_]' during Ipyrad Assembly of RADseq Data

How to plot slopes for factor levels, with confidence bands, using model-averaged coefficients? (PGLS, Phylogenetic Least Squares)

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