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20
Devhide
2015-06-24 18:05:20
3.2k
Views
Newick tree representation to scipy.cluster.hierarchy linkage matrix format
Published on
24 June 2015 at 18:05
#python
#scipy
#hierarchical-clustering
#phylogeny
828
Views
Displaying discrete character data on a phylogeny using R
Published on
24 November 2014 at 10:47
#r
#plot
#bioinformatics
#phylogeny
491
Views
Skipping slow tasks in a loop in R
Published on
13 September 2017 at 16:40
#r
#loops
#simulation
#phylogeny
#ape-phylo
425
Views
r - phyloseq - ordination of taxa other than species (family, order, etc.)
Published on
15 September 2017 at 02:30
#r
#phylogeny
#phyloseq
8.1k
Views
All possible Regression in R: Saving coefficients in a matrix
Published on
11 September 2013 at 09:24
#r
#matrix
#phylogeny
4.9k
Views
Branch length modification of a phylogenetic tree in R
Published on
12 September 2013 at 16:14
#r
#phylogeny
315
Views
Transform data frame/matrix to a different organized matrix
Published on
11 September 2013 at 12:14
#r
#matrix
#parser-combinators
#reshape2
#phylogeny
1.5k
Views
Phylocom non-ultrametric tree vs ultrametric tree
Published on
13 September 2013 at 09:04
#r
#tree
#phylogeny
512
Views
Conda install Figtree
Published on
26 September 2020 at 18:40
#linux
#anaconda
#package
#conda
#phylogeny
456
Views
Error in seq.int(from, to, length.out = n) : 'to' must be a finite number #81
Published on
25 October 2020 at 00:18
#r
#phylogeny
1.4k
Views
phylogenetic tree comparison
Published on
23 January 2012 at 11:14
#algorithm
#tree
#bioinformatics
#similarity
#phylogeny
342
Views
Comparing trees with different leaf sets (different number and label of leaf nodes)
Published on
03 January 2014 at 11:12
#algorithm
#graph
#tree
#comparison
#phylogeny
3.3k
Views
Node labels on circular phylogenetic tree
Published on
14 December 2014 at 22:55
#r
#cluster-analysis
#data-visualization
#phylogeny
#ape-phylo
439
Views
Bootstrapped tree values differ from PAST
Published on
17 December 2014 at 13:19
#r
#phylogeny
#r-daisy
110
Views
Phylogenetic linear model (PGLS): how to visualize uncertainty around model's predictions?
Published on
20 October 2023 at 07:28
#r
#predict
#phylogeny
#ggeffects
112
Views
Error when trying to install BioGeoBears package dependency rexpokit no longer on CRAN and won't install
Published on
24 October 2023 at 21:23
#r
#installation
#bioinformatics
#phylogeny
75
Views
how to generate a heatmap of a correlation matrix with clustering and phylogenetic tree
Published on
25 October 2023 at 20:37
#r
#heatmap
#correlation
#phylogeny
#cross-correlation
54
Views
use create_dendrogram with a phylogenetic tree
Published on
26 October 2023 at 13:46
#python-3.x
#numpy
#plotly
#biopython
#phylogeny
11
Views
Error Message: 'numpy.dtype[bool_]' during Ipyrad Assembly of RADseq Data
Published on
06 November 2023 at 17:53
#metadata
#bioinformatics
#phylogeny
#nomachine
48
Views
How to plot slopes for factor levels, with confidence bands, using model-averaged coefficients? (PGLS, Phylogenetic Least Squares)
Published on
06 November 2023 at 12:44
#r
#visualization
#confidence-interval
#phylogeny
#mumin
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