Question

How to draw dendrogram using ape package in R?

score 474 · Answer 1 · 2017-09-07 11:56:40

474

Views

How to draw dendrogram using ape package in R?

Published on 07 September 2017 at 11:56

score 490 · Answer 2 · 2017-09-13 16:40:57

490

Views

Skipping slow tasks in a loop in R

Published on 13 September 2017 at 16:40

score 3.3k · Answer 3 · 2014-12-14 22:55:43

3.3k

Views

Node labels on circular phylogenetic tree

Published on 14 December 2014 at 22:55

score 34 · Answer 4 · 2023-11-15 13:13:20

34

Views

Phangorn's nnls.tree fails with some trees in R

Published on 15 November 2023 at 13:13

score 3.6k · Answer 5 · 2018-11-04 17:15:46

3.6k

Views

rename phylo tip labels

Published on 04 November 2018 at 17:15

score 1k · Answer 6 · 2018-11-26 18:07:43

1k

Views

Setting the edge.lenth in a phylo object using a variable in a data.frame

Published on 26 November 2018 at 18:07

score 8.4k · Answer 7 · 2014-01-14 12:30:27

8.4k

Views

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Published on 14 January 2014 at 12:30

score 60 · Answer 8 · 2016-02-12 16:25:02

60

Views

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Published on 12 February 2016 at 16:25

score 1k · Answer 9 · 2020-07-27 18:40:27

1k

Views

Trying to write data into newick format R

Published on 27 July 2020 at 18:40

score 2k · Answer 10 · 2020-07-28 16:08:33

2k

Views

Error running PGLS in ape: "no covariate specified"

Published on 28 July 2020 at 16:08

score 564 · Answer 11 · 2014-06-04 05:23:50

564

Views

Mulitprocessing and rpy2 (with ape)

Published on 04 June 2014 at 05:23

score 105 · Answer 12 · 2021-02-10 11:41:21

105

Views

Circular phylogeny names cut

Published on 10 February 2021 at 11:41

score 141 · Answer 13 · 2022-11-17 21:30:34

141

Views

How do I fix my tree after dropping tip on a phylogenetic tree :0 character label?

Published on 17 November 2022 at 21:30

score 961 · Answer 14 · 2017-05-16 16:09:09

961

Views

Coloured lines for tangelgram - package ape function cophyloplot

Published on 16 May 2017 at 16:09

score 236 · Answer 15 · 2017-05-18 12:36:33

236

Views

Specifying colours in phylogenetic ancestral state reconstruction

Published on 18 May 2017 at 12:36

score 337 · Answer 16 · 2015-08-10 16:54:53

337

Views

Loop or Vectorize this function for Phylogenetic Tree Clade Dropping

Published on 10 August 2015 at 16:54

score 31 · Answer 17 · 2018-08-11 23:09:44

31

Views

I want to be able to manipulate objects in class 'phylo' - ie. round/ turn my bootstrap values from decimals (.998) into percentages (99%)

Published on 11 August 2018 at 23:09

score 709 · Answer 18 · 2015-05-28 16:27:31

709

Views

floating.pie error while using nodelables from ape package

Published on 28 May 2015 at 16:27

score 1.8k · Answer 19 · 2013-07-22 23:01:16

1.8k

Views

Combine phylogenetic tree with x,y graph

Published on 22 July 2013 at 23:01

score 174 · Answer 20 · 2021-09-15 06:07:54

174

Views

Ancestral state reconstruction, polytomies and the absence of branch lengths

Published on 15 September 2021 at 06:07

List Question

How to draw dendrogram using ape package in R?

Skipping slow tasks in a loop in R

Node labels on circular phylogenetic tree

Phangorn's nnls.tree fails with some trees in R

rename phylo tip labels

Setting the edge.lenth in a phylo object using a variable in a data.frame

How to use as.DNAbin{ape} with DNA sequences stored in a dataframe?

Error in "birthdeath" function (phylogenetic tree analysis)

Trying to write data into newick format R

Error running PGLS in ape: "no covariate specified"

Mulitprocessing and rpy2 (with ape)

Circular phylogeny names cut

How do I fix my tree after dropping tip on a phylogenetic tree :0 character label?

Coloured lines for tangelgram - package ape function cophyloplot

Specifying colours in phylogenetic ancestral state reconstruction

Loop or Vectorize this function for Phylogenetic Tree Clade Dropping

I want to be able to manipulate objects in class 'phylo' - ie. round/ turn my bootstrap values from decimals (.998) into percentages (99%)

floating.pie error while using nodelables from ape package

Combine phylogenetic tree with x,y graph

Ancestral state reconstruction, polytomies and the absence of branch lengths

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