Question

Rentrez pubmed search - order by descending publication date

score 35 · Answer 1 · 2023-11-29 09:35:52

35

Views

Rentrez pubmed search - order by descending publication date

Published on 29 November 2023 at 09:35

score 59 · Answer 2 · 2023-11-28 03:55:50

59

Views

How would I convert .xml files into .fasta format

Published on 28 November 2023 at 03:55

score 271 · Answer 3 · 2022-05-01 15:49:52

271

Views

NotXMLError: Failed to parse the XML data

Published on 01 May 2022 at 15:49

score 518 · Answer 4 · 2022-03-20 12:37:11

518

Views

Using R to fetch a Pubmed abstract by using its title

Published on 20 March 2022 at 12:37

score 93 · Answer 5 · 2022-04-02 00:56:55

93

Views

How do I provide my Identity / Email when connecting to NCBI through Rentrez?

Published on 02 April 2022 at 00:56

score 224 · Answer 6 · 2022-11-05 15:18:04

224

Views

Extracting author and affiliation from xml file retrieved using rentrez

Published on 05 November 2022 at 15:18

score 695 · Answer 7 · 2017-05-18 16:38:54

695

Views

Calculating number of xmlchildren under each parent node for a list in R

Published on 18 May 2017 at 16:38

score 269 · Answer 8 · 2017-05-23 21:35:02

269

Views

How to track which protein ID is linked to which gene ID with rentrez

Published on 23 May 2017 at 21:35

score 135 · Answer 9 · 2017-05-25 19:39:46

135

Views

How to keep Protein ID when retrieving coding sequences with rentrez

Published on 25 May 2017 at 19:39

score 604 · Answer 10 · 2017-06-02 04:15:05

604

Views

Differences between Biopython NCBI/Entrez esummary output and R package output

Published on 02 June 2017 at 04:15

score 140 · Answer 11 · 2018-05-23 00:55:07

140

Views

Vectorizing for-loop in R

Published on 23 May 2018 at 00:55

score 219 · Answer 12 · 2018-08-06 20:48:25

219

Views

Lists of summaries from rentrez stop working after being merged using append()

Published on 06 August 2018 at 20:48

score 493 · Answer 13 · 2021-03-05 15:25:25

493

Views

How to retrieve data using the rentrez package by giving a list of query names instead of a single one?

Published on 05 March 2021 at 15:25

score 1k · Answer 14 · 2020-05-04 19:50:26

1k

Views

Is it possible to get the number of times an article has been cited?

Published on 04 May 2020 at 19:50

score 1.1k · Answer 15 · 2021-12-11 18:27:52

1.1k

Views

Obtaining data from NCBI gene database with R

Published on 11 December 2021 at 18:27

score 112 · Answer 16 · 2015-04-08 15:24:17

112

Views

.attrs and repetitive entries in an R list

Published on 08 April 2015 at 15:24

score 171 · Answer 17 · 2023-01-21 22:20:20

171

Views

Downloading DNA sequence data in R using entrez_fetch: cannot retrieve query

Published on 21 January 2023 at 22:20

score 106 · Answer 18 · 2023-01-27 04:12:18

106

Views

Rentrez is pulling the wrong data from NCBI in R?

Published on 27 January 2023 at 04:12

score 135 · Answer 19 · 2023-01-27 17:49:38

135

Views

How do I download a large number of GenBank sequences using entrez_fetch in R?

Published on 27 January 2023 at 17:49

score 474 · Answer 20 · 2018-09-10 15:14:10

474

Views

Parsing xml from a NCBI entrez in R

Published on 10 September 2018 at 15:14

List Question

Rentrez pubmed search - order by descending publication date

How would I convert .xml files into .fasta format

NotXMLError: Failed to parse the XML data

Using R to fetch a Pubmed abstract by using its title

How do I provide my Identity / Email when connecting to NCBI through Rentrez?

Extracting author and affiliation from xml file retrieved using rentrez

Calculating number of xmlchildren under each parent node for a list in R

How to track which protein ID is linked to which gene ID with rentrez

How to keep Protein ID when retrieving coding sequences with rentrez

Differences between Biopython NCBI/Entrez esummary output and R package output

Vectorizing for-loop in R

Lists of summaries from rentrez stop working after being merged using append()

How to retrieve data using the rentrez package by giving a list of query names instead of a single one?

Is it possible to get the number of times an article has been cited?

Obtaining data from NCBI gene database with R

.attrs and repetitive entries in an R list

Downloading DNA sequence data in R using entrez_fetch: cannot retrieve query

Rentrez is pulling the wrong data from NCBI in R?

How do I download a large number of GenBank sequences using entrez_fetch in R?

Parsing xml from a NCBI entrez in R

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