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20
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Rentrez pubmed search - order by descending publication date

Published on
#r #pubmed #rentrez
66
Views

How would I convert .xml files into .fasta format

Published on
#r #bioconductor #rentrez
278
Views

NotXMLError: Failed to parse the XML data

Published on
#python #biopython #pubmed #rentrez #pubmed-api
525
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Using R to fetch a Pubmed abstract by using its title

Published on
#r #pubmed #rentrez
102
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How do I provide my Identity / Email when connecting to NCBI through Rentrez?

Published on
#r #bioinformatics #ncbi #rentrez
231
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Extracting author and affiliation from xml file retrieved using rentrez

Published on
#r #database #pubmed #rentrez #pubmed-api
703
Views

Calculating number of xmlchildren under each parent node for a list in R

Published on
#r #xml #xpath #pubmed #rentrez
277
Views

How to track which protein ID is linked to which gene ID with rentrez

Published on
#r #bioconductor #ncbi #rentrez
142
Views

How to keep Protein ID when retrieving coding sequences with rentrez

Published on
#r #bioconductor #ncbi #rentrez
610
Views

Differences between Biopython NCBI/Entrez esummary output and R package output

Published on
#python #r #biopython #ncbi #rentrez
148
Views

Vectorizing for-loop in R

Published on
#r #for-loop #vectorization #pubmed #rentrez
225
Views

Lists of summaries from rentrez stop working after being merged using append()

Published on
#r #append #rentrez
501
Views

How to retrieve data using the rentrez package by giving a list of query names instead of a single one?

Published on
#r #rentrez
1k
Views

Is it possible to get the number of times an article has been cited?

Published on
#python-3.x #web-crawler #citations #pubmed #rentrez
1.1k
Views

Obtaining data from NCBI gene database with R

Published on
#html #r #rselenium #ncbi #rentrez
118
Views

.attrs and repetitive entries in an R list

Published on
#r #ncbi #rentrez
178
Views

Downloading DNA sequence data in R using entrez_fetch: cannot retrieve query

Published on
#r #bioinformatics #rentrez
112
Views

Rentrez is pulling the wrong data from NCBI in R?

Published on
#r #bioinformatics #dna-sequence #rentrez
141
Views

How do I download a large number of GenBank sequences using entrez_fetch in R?

Published on
#r #bioinformatics #dna-sequence #ncbi #rentrez
482
Views

Parsing xml from a NCBI entrez in R

Published on
#r #xml #xml-parsing #rentrez

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