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20
Devhide
2023-11-29 09:35:52
35
Views
Rentrez pubmed search - order by descending publication date
Published on
29 November 2023 at 09:35
#r
#pubmed
#rentrez
59
Views
How would I convert .xml files into .fasta format
Published on
28 November 2023 at 03:55
#r
#bioconductor
#rentrez
271
Views
NotXMLError: Failed to parse the XML data
Published on
01 May 2022 at 15:49
#python
#biopython
#pubmed
#rentrez
#pubmed-api
518
Views
Using R to fetch a Pubmed abstract by using its title
Published on
20 March 2022 at 12:37
#r
#pubmed
#rentrez
93
Views
How do I provide my Identity / Email when connecting to NCBI through Rentrez?
Published on
02 April 2022 at 00:56
#r
#bioinformatics
#ncbi
#rentrez
224
Views
Extracting author and affiliation from xml file retrieved using rentrez
Published on
05 November 2022 at 15:18
#r
#database
#pubmed
#rentrez
#pubmed-api
695
Views
Calculating number of xmlchildren under each parent node for a list in R
Published on
18 May 2017 at 16:38
#r
#xml
#xpath
#pubmed
#rentrez
269
Views
How to track which protein ID is linked to which gene ID with rentrez
Published on
23 May 2017 at 21:35
#r
#bioconductor
#ncbi
#rentrez
135
Views
How to keep Protein ID when retrieving coding sequences with rentrez
Published on
25 May 2017 at 19:39
#r
#bioconductor
#ncbi
#rentrez
604
Views
Differences between Biopython NCBI/Entrez esummary output and R package output
Published on
02 June 2017 at 04:15
#python
#r
#biopython
#ncbi
#rentrez
140
Views
Vectorizing for-loop in R
Published on
23 May 2018 at 00:55
#r
#for-loop
#vectorization
#pubmed
#rentrez
219
Views
Lists of summaries from rentrez stop working after being merged using append()
Published on
06 August 2018 at 20:48
#r
#append
#rentrez
493
Views
How to retrieve data using the rentrez package by giving a list of query names instead of a single one?
Published on
05 March 2021 at 15:25
#r
#rentrez
1k
Views
Is it possible to get the number of times an article has been cited?
Published on
04 May 2020 at 19:50
#python-3.x
#web-crawler
#citations
#pubmed
#rentrez
1.1k
Views
Obtaining data from NCBI gene database with R
Published on
11 December 2021 at 18:27
#html
#r
#rselenium
#ncbi
#rentrez
112
Views
.attrs and repetitive entries in an R list
Published on
08 April 2015 at 15:24
#r
#ncbi
#rentrez
171
Views
Downloading DNA sequence data in R using entrez_fetch: cannot retrieve query
Published on
21 January 2023 at 22:20
#r
#bioinformatics
#rentrez
106
Views
Rentrez is pulling the wrong data from NCBI in R?
Published on
27 January 2023 at 04:12
#r
#bioinformatics
#dna-sequence
#rentrez
135
Views
How do I download a large number of GenBank sequences using entrez_fetch in R?
Published on
27 January 2023 at 17:49
#r
#bioinformatics
#dna-sequence
#ncbi
#rentrez
474
Views
Parsing xml from a NCBI entrez in R
Published on
10 September 2018 at 15:14
#r
#xml
#xml-parsing
#rentrez
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