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1.1k
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Why doesn't rsync work when connecting to NCBI's FTP server home page?

Published on
#ftp #rsync #bioinformatics #ncbi
827
Views

PSIPRED, how to install and make it work?

Published on
#blast #ncbi
917
Views

ete3: How to get taxonomic rank names from taxonomy id?

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#python #bioinformatics #taxonomy #ncbi #ete3
2.4k
Views

Blast+ Local Configuration: How to configure nt and nr databases?

Published on
#command-line #path #bioinformatics #blast #ncbi
1.6k
Views

Downloading Protein Sequences of multiple Organisms

Published on
#python #python-2.7 #bioinformatics #biopython #ncbi
435
Views

Return values from a Python Entrez dictionary of dictionaries

Published on
#python #xml #r #dictionary #ncbi
110
Views

Searching Entrez based on paper title

Published on
#python #biopython #ncbi #pubmed
84
Views

Biopython bioSQL Unable to remove database using server.remove_database('dbname')

Published on
#python #mysql #biopython #ncbi
158
Views

How do I configure blast+ to access databases on an external hard drive?

Published on
#cmd #environment-variables #bioinformatics #blast #ncbi
318
Views

Download all NCBI PubMed IDs based on a tag

Published on
#python #ncbi
1k
Views

Is there an easy way to download genomes in fasta format from NCBI using Python?

Published on
#python #api #bioinformatics #genome #ncbi
354
Views

I'm having difficulty using Beautiful Soup to scrape data from an NCBI website

Published on
#web-scraping #beautifulsoup #bioinformatics #ncbi
97
Views

how to download automatically complete genomes with biopython on ncbi

Published on
#biopython #ncbi
148
Views

Setting the version number in an NCBI c++ toolkit app

Published on
#c++ #toolkit #ncbi
8.1k
Views

How to extract the first hit elements from an XML NCBI BLAST file?

Published on
#python #xml #bioinformatics #elementtree #ncbi
670
Views

Get XML value by attribute name

Published on
#php #xml #simplexml #ncbi
1.5k
Views

Error: Too many positional arguments (1) when using BLAST w/ a bash for loop

Published on
#bash #bioinformatics #blast #ncbi
150
Views

Chromosomal position to gene position conversion in a sample PLINK tped file using reference GTF file

Published on
#shell #bioinformatics #ncbi #bed
1.8k
Views

Downloading multiple fasta files from ncbi

Published on
#ftp #wget #fasta #ncbi
209
Views

inconsistency with ftp sites in R

Published on
#r #ncbi

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