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1.1k
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Why doesn't rsync work when connecting to NCBI's FTP server home page?

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#ftp #rsync #bioinformatics #ncbi
816
Views

PSIPRED, how to install and make it work?

Published on
#blast #ncbi
911
Views

ete3: How to get taxonomic rank names from taxonomy id?

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#python #bioinformatics #taxonomy #ncbi #ete3
2.4k
Views

Blast+ Local Configuration: How to configure nt and nr databases?

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#command-line #path #bioinformatics #blast #ncbi
1.6k
Views

Downloading Protein Sequences of multiple Organisms

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#python #python-2.7 #bioinformatics #biopython #ncbi
429
Views

Return values from a Python Entrez dictionary of dictionaries

Published on
#python #xml #r #dictionary #ncbi
101
Views

Searching Entrez based on paper title

Published on
#python #biopython #ncbi #pubmed
77
Views

Biopython bioSQL Unable to remove database using server.remove_database('dbname')

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#python #mysql #biopython #ncbi
149
Views

How do I configure blast+ to access databases on an external hard drive?

Published on
#cmd #environment-variables #bioinformatics #blast #ncbi
311
Views

Download all NCBI PubMed IDs based on a tag

Published on
#python #ncbi
1k
Views

Is there an easy way to download genomes in fasta format from NCBI using Python?

Published on
#python #api #bioinformatics #genome #ncbi
350
Views

I'm having difficulty using Beautiful Soup to scrape data from an NCBI website

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#web-scraping #beautifulsoup #bioinformatics #ncbi
93
Views

how to download automatically complete genomes with biopython on ncbi

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#biopython #ncbi
142
Views

Setting the version number in an NCBI c++ toolkit app

Published on
#c++ #toolkit #ncbi
8.1k
Views

How to extract the first hit elements from an XML NCBI BLAST file?

Published on
#python #xml #bioinformatics #elementtree #ncbi
666
Views

Get XML value by attribute name

Published on
#php #xml #simplexml #ncbi
1.5k
Views

Error: Too many positional arguments (1) when using BLAST w/ a bash for loop

Published on
#bash #bioinformatics #blast #ncbi
141
Views

Chromosomal position to gene position conversion in a sample PLINK tped file using reference GTF file

Published on
#shell #bioinformatics #ncbi #bed
1.8k
Views

Downloading multiple fasta files from ncbi

Published on
#ftp #wget #fasta #ncbi
204
Views

inconsistency with ftp sites in R

Published on
#r #ncbi

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