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20
224
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Uploading Spatial 10x data into seurat

Published on
#r #spatial #seurat
87
Views

Convert character string and data frame into another data frame

Published on
#r #bioinformatics #seurat
276
Views

Error in sparseMatrix(i = x[["indices"]][] + 1, p = x[["indptr"]][], x = x[["data"]][], : 'dims' must contain all (i,j) pairs

Published on
#r #seurat #scanpy
132
Views

Load h5mu data from python in R to create a seurat object?

Published on
#r #seurat
7.5k
Views

RunUMAP code error after merged spatial transcriptomic objects

Published on
#pca #seurat
105
Views

Visualizing 3 features simultaneously in Seurat/single cell RNA sequencing

Published on
#bioinformatics #seurat #sequencing
869
Views

invalid class “LogMap” object: Rownames must be supplied When trying to create a Seurat object

Published on
#r #dataframe #seurat
260
Views

Issue with CellCycleScoring in Seurat Saying 'Rowmeans' subscript is out of bounds

Published on
#r #cell #seurat #rna-seq
134
Views

How do I change the theme on an array of graphs using VlnPLot in Seurat (in R)?

Published on
#r #ggplot2 #seurat
1.6k
Views

Invalid class "Graph" object: superclass "mMatrix" not defined (Seurat/R)

Published on
#r #object #nearest-neighbor #seurat #harmony
311
Views

Problem with using Read10x function of Seurat

Published on
#r #seurat #loaddata
1.2k
Views

Error loading paramSweep_v3 in DoubletFinder in R

Published on
#r #genome #seurat #rna-seq
52
Views

How to analyze spatial transcriptomic data without .h5 file?

Published on
#r #seurat
278
Views

using purrr::map to rename row names in elements within lists in a bigger list?

Published on
#r #dictionary #purrr #seurat
159
Views

Forcing ggplot to display graphs with no data?

Published on
#r #ggplot2 #seurat
1.7k
Views

No applicable method for 'DefaultAssay' applied to an object of class "list"

Published on
#r #seurat
151
Views

R variable not recognized (argument is of length zero)

Published on
#r #seurat
1.8k
Views

Seurat UMAP visualization result is mirrored after running in two identical environments

Published on
#r #seurat #runumap
332
Views

for loop function in Seurat analysis in R

Published on
#r #for-loop #marker #seurat
1k
Views

How to index R objects within a for loop?

Published on
#r #seurat

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