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20
Devhide
2015-06-12 15:48:33
674
Views
ValueError: error during iteration "Pysam"
Published on
12 June 2015 at 15:48
#python
#pysam
3.7k
Views
Keep getting error incompatible library version libchtslib.so requires version 9.0.0 or later, but libcurl.4.dylib provides version 7.0.0
Published on
06 January 2017 at 17:53
#python
#macos
#terminal
#pip
#pysam
194
Views
How do I fix the error when installing the pysam package?
Published on
13 December 2023 at 18:52
#python
#pip
#package
#console
#pysam
63
Views
How do i get and use AlignmentHeader from pysam?
Published on
22 December 2023 at 18:10
#bam
#pysam
2.3k
Views
Can't install pysam with pip in Python 3.6
Published on
21 September 2018 at 19:51
#python
#pip
#installation
#pysam
975
Views
How to use pysam.view() to convert SAM to BAM
Published on
05 June 2021 at 11:39
#python
#sam
#samtools
#pysam
#bam
1.1k
Views
How to use pysam.view to emulate all functions of samtools view
Published on
24 February 2016 at 10:26
#samtools
#pysam
624
Views
How to add "OQ" tag with read quality score as additional field in the bam file using pysam
Published on
18 July 2020 at 11:28
#samtools
#pysam
396
Views
Cannot install pysam
Published on
03 June 2022 at 15:23
#python
#bash
#pip
#debian
#pysam
145
Views
Docker installation testing fails because of missing dependency which was installed earlier
Published on
21 November 2022 at 16:03
#python
#docker
#dockerfile
#pysam
#htslib
642
Views
sum elements in python list if match condition
Published on
26 November 2022 at 15:38
#python
#bam
#pysam
523
Views
Error message when use Python multiprocessing
Published on
06 August 2015 at 15:33
#python
#parallel-processing
#multiprocessing
#pysam
330
Views
Changing an orientation of a reverse sequence in the fasta file doesnt work
Published on
01 August 2018 at 11:03
#python
#python-2.7
#pysam
1.1k
Views
extract lines from bam file
Published on
31 March 2020 at 17:13
#python
#pysam
1.5k
Views
Accessing Bam file at particular location using Pysam
Published on
07 June 2015 at 18:52
#python
#bioinformatics
#python-module
#biopython
#pysam
29.4k
Views
unable to execute 'x86_64-conda_cos6-linux-gnu-gcc': No such file or directory (pysam installation)
Published on
27 September 2017 at 14:47
#linux
#python-2.7
#gcc
#anaconda
#pysam
1.9k
Views
manually installing pysam error: "ImportError: No module named version"
Published on
27 September 2017 at 12:19
#python
#linux
#anaconda
#conda
#pysam
226
Views
Replace concatenation with join
Published on
29 September 2017 at 22:26
#python
#bioinformatics
#pysam
113
Views
Bam file processing function code with parseargs in Python and Ubuntu
Published on
17 September 2021 at 18:28
#python
#pandas
#argparse
#pysam
#bam
454
Views
Failed to install pysam 0.13
Published on
27 December 2017 at 10:56
#python
#c
#gcc
#pip
#pysam
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