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20
97
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#ls #snakemake #bam
807
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1k
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#perl #hash #mapping #bioinformatics #bam
255
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#alignment #bam
94
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#bam #pysam
173
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#bash #algorithm #awk #sed #bam
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637
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#bioinformatics #samtools #bam
555
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convert CRAM file to SAM file

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#bioinformatics #genome #sam #scramble #bam
477
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#google-cloud-platform #bioinformatics #vcf-variant-call-format #google-genomics #bam
1k
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#python #sam #samtools #pysam #bam
191
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MissingOutputException snakemake

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2k
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#bash #extract #bam
150
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Find sequencing reads with insertions longer than number

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#sequencing #samtools #bam
647
Views

sum elements in python list if match condition

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#python #bam #pysam
112
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CRISPR genome wide screen analysis using MAGeCK-- Loss of reads/sgRNA using MAGeCK count function?

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#python #bioinformatics #fastq #bam
191
Views

pilon error, file .bam must be indexed BAM

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6.2k
Views

Create VCF from .bim, .bed and .fam files

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#bioinformatics #genetics #bam #vcf-variant-call-format #bed
93
Views

How to write rules for software with version specific shell calls? (E.g. Samtools 1.3.1 and 0.1.18)

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#bioinformatics #snakemake #samtools #bam
121
Views

Bam file processing function code with parseargs in Python and Ubuntu

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#python #pandas #argparse #pysam #bam

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