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List Question
20
Devhide
2025-01-06 17:54:35
389
Views
Missing data per site
Published on
06 January 2025 at 17:54
#missing-data
#vcftools
795
Views
Preparing a Perl file to run with Ubuntu and tabix
Published on
06 January 2025 at 13:26
#perl
#ubuntu
#bioinformatics
#vcf-variant-call-format
#vcftools
135
Views
bcftools make fails with numerous vcfmerge errors in win10
Published on
06 January 2025 at 12:36
#compiler-errors
#vcftools
#bcftools
2.5k
Views
Combine multiple VCF files into one large VCF file
Published on
06 January 2025 at 13:26
#bioinformatics
#vcftools
#bcftools
#hail
#vcf-variant-call-format
879
Views
How to know whether a unix command execution is successful
Published on
06 January 2025 at 12:36
#linux
#shell
#unix
#vcftools
#bcftools
872
Views
How can I filter by read depth using vcftools?
Published on
06 January 2025 at 12:33
#vcftools
624
Views
How to extract genotype information for each sample as a string from a VCF file using htslib?
Published on
06 January 2025 at 12:39
#c++
#vcf-vcard
#vcf-variant-call-format
#vcftools
#htslib
96
Views
python error: Traceback (most recent call last), IndexError: list index out of range
Published on
06 January 2025 at 12:38
#python
#vcftools
97
Views
Apache Kafka and Nifi for processing a VCF file
Published on
06 January 2025 at 12:34
#apache-kafka
#apache-nifi
#vcftools
7.5k
Views
Can't locate Bio/SeqIO.pm in @INC
Published on
06 January 2025 at 12:32
#perl
#bioperl
#vcftools
1.5k
Views
Slow python code to parse VCF file and insert in database
Published on
06 January 2025 at 12:35
#python
#vcf-variant-call-format
#vcftools
92
Views
Merge three columns in one (linux, python, or perl)
Published on
06 January 2025 at 12:34
#linux
#csv
#merge
#columnsorting
#vcftools
5.4k
Views
Linux Makefile: undefined reference to 'gzbuffer' (where LIB = -lz)
Published on
06 January 2025 at 12:36
#zlib
#vcftools
95
Views
Genetic differentiation in R, function genetic_diff()
Published on
06 January 2025 at 12:34
#r
#vcftools
1k
Views
VCF4.2 file not recognised by GATK
Published on
06 January 2025 at 12:32
#bioinformatics
#vcf-variant-call-format
#vcftools
#picard
252
Views
Choose higher values from two columns after extracting the number, R
Published on
06 January 2025 at 12:36
#r
#vcftools
128
Views
match 1,2,5 columns of file1 with 1,2,3 columns of file2 respectively and output should have matched rows from file 2. second file is zipped file .gz
Published on
06 January 2025 at 12:39
#linux
#awk
#vcftools
#bcftools
996
Views
Bash script for pairwise comparisons
Published on
06 January 2025 at 12:32
#bash
#vcftools
586
Views
How to fix this error when installing bcftools on MAC? Problem with C: [ploidy.o] Error 1
Published on
06 January 2025 at 12:38
#linux
#macos
#gcc
#vcf-variant-call-format
#vcftools
932
Views
vcf to ped format: redefine non-dbSNPs
Published on
06 January 2025 at 12:31
#bioinformatics
#vcftools
#vcf-variant-call-format
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