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20
398
Views

Missing data per site

Published on
#missing-data #vcftools
804
Views

Preparing a Perl file to run with Ubuntu and tabix

Published on
#perl #ubuntu #bioinformatics #vcf-variant-call-format #vcftools
143
Views

bcftools make fails with numerous vcfmerge errors in win10

Published on
#compiler-errors #vcftools #bcftools
2.5k
Views

Combine multiple VCF files into one large VCF file

Published on
#bioinformatics #vcftools #bcftools #hail #vcf-variant-call-format
887
Views

How to know whether a unix command execution is successful

Published on
#linux #shell #unix #vcftools #bcftools
879
Views

How can I filter by read depth using vcftools?

Published on
#vcftools
632
Views

How to extract genotype information for each sample as a string from a VCF file using htslib?

Published on
#c++ #vcf-vcard #vcf-variant-call-format #vcftools #htslib
103
Views

python error: Traceback (most recent call last), IndexError: list index out of range

Published on
#python #vcftools
106
Views

Apache Kafka and Nifi for processing a VCF file

Published on
#apache-kafka #apache-nifi #vcftools
7.5k
Views

Can't locate Bio/SeqIO.pm in @INC

Published on
#perl #bioperl #vcftools
1.5k
Views

Slow python code to parse VCF file and insert in database

Published on
#python #vcf-variant-call-format #vcftools
98
Views

Merge three columns in one (linux, python, or perl)

Published on
#linux #csv #merge #columnsorting #vcftools
5.4k
Views

Linux Makefile: undefined reference to 'gzbuffer' (where LIB = -lz)

Published on
#zlib #vcftools
102
Views

Genetic differentiation in R, function genetic_diff()

Published on
#r #vcftools
1k
Views

VCF4.2 file not recognised by GATK

Published on
#bioinformatics #vcf-variant-call-format #vcftools #picard
258
Views

Choose higher values from two columns after extracting the number, R

Published on
#r #vcftools
133
Views

match 1,2,5 columns of file1 with 1,2,3 columns of file2 respectively and output should have matched rows from file 2. second file is zipped file .gz

Published on
#linux #awk #vcftools #bcftools
1k
Views

Bash script for pairwise comparisons

Published on
#bash #vcftools
591
Views

How to fix this error when installing bcftools on MAC? Problem with C: [ploidy.o] Error 1

Published on
#linux #macos #gcc #vcf-variant-call-format #vcftools
937
Views

vcf to ped format: redefine non-dbSNPs

Published on
#bioinformatics #vcftools #vcf-variant-call-format

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