Question

vcf-consensus script error: The sequence N not found in the fasta file

score 717 · Answer 1 · 2025-01-06 13:29:38

717

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vcf-consensus script error: The sequence N not found in the fasta file

Published on 06 January 2025 at 13:29

score 168 · Answer 2 · 2025-01-06 13:25:26

168

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problems executing tajD test using pegas in R

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score 313 · Answer 3 · 2025-01-06 13:29:44

313

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Merging multiple files with two common columns, and replace the blank to 0

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score 433 · Answer 4 · 2024-12-28 22:21:08

433

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Split and count AWK

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score 289 · Answer 5 · 2025-01-06 13:26:43

289

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base recalibrator --known-sites argument does not work

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score 71 · Answer 6 · 2025-01-06 13:26:41

71

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score 137 · Answer 7 · 2025-01-06 13:23:53

137

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Published on 06 January 2025 at 13:23

score 125 · Answer 8 · 2025-01-06 13:29:43

125

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BCFtools merge command collapsing non-identical variants to single record

Published on 06 January 2025 at 13:29

score 55 · Answer 9 · 2025-01-06 13:26:11

55

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Take file as an input and run awk command on it

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score 2.6k · Answer 10 · 2025-01-06 13:26:40

2.6k

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score 385 · Answer 11 · 2024-12-27 09:34:55

385

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score 75 · Answer 12 · 2025-01-06 13:25:36

75

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score 71 · Answer 13 · 2025-01-06 13:26:39

71

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plot overlap between two datasets using rsid value

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score 477 · Answer 14 · 2025-01-06 13:26:39

477

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score 795 · Answer 15 · 2025-01-06 13:26:37

795

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score 233 · Answer 16 · 2025-01-06 13:24:20

233

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score 2.5k · Answer 17 · 2025-01-06 13:26:36

2.5k

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score 919 · Answer 18 · 2025-01-06 13:30:10

919

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Published on 06 January 2025 at 13:30

score 462 · Answer 19 · 2025-01-06 13:27:59

462

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extract variable string content between pipes in a VCF file

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score 540 · Answer 20 · 2025-01-06 13:27:58

540

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List Question

vcf-consensus script error: The sequence N not found in the fasta file

problems executing tajD test using pegas in R

Merging multiple files with two common columns, and replace the blank to 0

Split and count AWK

base recalibrator --known-sites argument does not work

Merging VCF Files and Expanding Metadata Efficiently

iterating on vcf file using cyvcf2

BCFtools merge command collapsing non-identical variants to single record

Take file as an input and run awk command on it

Cannot sort VCF with bcftools due to invalid input

Issue with map file output from plink

Optimal Solution for Integer Encoding VCF file

plot overlap between two datasets using rsid value

Running DeepVariant on GRCh38 Whole Exome Sequence

Preparing a Perl file to run with Ubuntu and tabix

Grep multiple positions with/without ID

Combine multiple VCF files into one large VCF file

Count total unique number of records based on columns from multiple VCF files

extract variable string content between pipes in a VCF file

Removing only part of character line in txt file - chr string

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